CDS

Accession Number TCMCG051C36627
gbkey CDS
Protein Id XP_006375736.1
Location complement(join(883663..883893,884259..884322,884595..884662,884845..884981,885660..885757,885835..885902,885992..886073,886158..886168))
Gene LOC7481718
GeneID 7481718
Organism Populus trichocarpa

Protein

Length 252aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_006375674.2
Definition malignant T-cell-amplified sequence 1 homolog isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category K
Description Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
KEGG_TC -
KEGG_Module M00177        [VIEW IN KEGG]
M00179        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE br01610        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03011        [VIEW IN KEGG]
KEGG_ko ko:K02883        [VIEW IN KEGG]
ko:K07575        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03010        [VIEW IN KEGG]
map03010        [VIEW IN KEGG]
GOs GO:0001731        [VIEW IN EMBL-EBI]
GO:0002181        [VIEW IN EMBL-EBI]
GO:0002183        [VIEW IN EMBL-EBI]
GO:0002188        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006413        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008284        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016032        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019080        [VIEW IN EMBL-EBI]
GO:0019081        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022411        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0032790        [VIEW IN EMBL-EBI]
GO:0032984        [VIEW IN EMBL-EBI]
GO:0032988        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044403        [VIEW IN EMBL-EBI]
GO:0044419        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0075522        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903008        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTCAAAAAGTTTTCAAGTGATGAAGTATCGTCACAAAACCAAGTGAAAGCATCAGTTCAACGCAAAATTCGACAAAGCATTGCTGATGAGTACCCAGGACTTGAACCAGTATTGGATGATTTGCTGCCAAAGAAATCCCCTTTAATTGTTGTTAAATGTCAGAATCATTTGAATCTGGTGGTGGTGAATAACGTGCCATTGTTTTTTAATATAAGGGATGGACCTTACATGCCTACTCTACGACTTCTTCATCAATATCCAAACATAATGAAAAAATTGCAAGTTGACAGAGGTGCCATAAAATTCGTCCTTTCTGGTGCTAACATAATGTGTCCTGGACTCACATCTCCCGGCGGTGCATTAGATGATGAAGTAGATGCAGAAACTCCTGTGGCTATAATGGCTGAAGGAAAGCAACATGCTCTTGCTATTGGCTTTACAAAAATGTCAGCAAAAGACATAAAGACAATCAACAAGGGAATTGGTGTGGACAACATGCATTATCTCAATGATGGTCTTTGGAAGTTGCATTATGCAGATGGAGCGTTTGGATTGAGGTTTTCCCCCAGAAAAACTGCAGTATTGTCGTTTATACAAGACAGAAAGAGCATATATTATTTGCCTCGACGTGGCTACGCAGATGTCCTGTCTCCTGATGTTGCTAAAGTAGTTTGTGTGAAGTGTTCTCTGCTCGTTGTCACCTTTTTTCCCTGTACACAACAGAAATTGATTTTACCATGTAGATCTACCGTTTAA
Protein:  
MFKKFSSDEVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVVKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGALDDEVDAETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKLHYADGAFGLRFSPRKTAVLSFIQDRKSIYYLPRRGYADVLSPDVAKVVCVKCSLLVVTFFPCTQQKLILPCRSTV